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http://searchlauncher.bcm.tmc.edu/multi-align/multi-align.html Multiple sequence aligments |
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http://genome.ucsc.edu/cgi-bin/hgGateway?org=human Human Genome Browser |
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http://www.ncbi.nlm.nih.gov/blast/ see also: BLASTing the genome (instructions from Chris) |
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http://genes.mit.edu/GENSCAN.html Predicting the locations and exon-intron structures of genes in genomic sequences from a variety of organisms. |
Genome Channel |
http://compbio.ornl.gov/channel/ A JAVA interactive browser interface provides a rich graphical view of contigs, clones, genes, and other annotation features. |
| NCBI Electronic PCR |
http://www.ncbi.nlm.nih.gov/genome/sts/epcr.cgi Test a DNA sequence for the presence of sequence tagged sites by searching for subsequences that closely match the PCR primers and have the correct order, orientation, and spacing that they could plausibly prime the amplification of a PCR product of the correct molecular weight. |
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http://www.ddbj.nig.ac.jp/E-mail/homology.html Alignment and homology search tools at the DNA Data Bank of Japan (DDBJ) |
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http://www.ebi.ac.uk/services Branched sitemap of all EMBL/EBI genome services |